| AddObserver(CGObserver *observer) | votca::csg::CsgApplication | inline |
| AddProgramOptions(const std::string &group="") | votca::tools::Application | |
| Application() | votca::tools::Application | |
| BeginEvaluate(Topology *top, Topology *top_ref=nullptr) | votca::csg::CsgApplication | virtual |
| CheckRequired(const std::string &option_name, const std::string &error_msg="") | votca::tools::Application | |
| continue_execution_ | votca::tools::Application | protected |
| CsgApplication()=default | votca::csg::CsgApplication | |
| do_mapping_ | votca::csg::CsgApplication | protected |
| DoMapping(void) override | GmxTopolApp | inlinevirtual |
| DoMappingDefault(void) | votca::csg::CsgApplication | inlinevirtual |
| DoThreaded(void) | votca::csg::CsgApplication | inlinevirtual |
| DoTrajectory(void) | votca::csg::CsgApplication | inlinevirtual |
| EndEvaluate() | votca::csg::CsgApplication | virtual |
| EvalConfiguration(Topology *top, Topology *top_ref=nullptr) | votca::csg::CsgApplication | virtual |
| EvaluateOptions(void) override | GmxTopolApp | inlinevirtual |
| EvaluateTopology(Topology *top, Topology *top_ref) override | GmxTopolApp | virtual |
| Exec(int argc, char **argv) | votca::tools::Application | |
| ForkWorker(void) | votca::csg::CsgApplication | virtual |
| HelpText(ostream &out) override | GmxTopolApp | inlinevirtual |
| Initialize(void) override | GmxTopolApp | virtual |
| is_first_frame_ | votca::csg::CsgApplication | protected |
| MergeWorker(Worker *worker) | votca::csg::CsgApplication | virtual |
| myWorkers_ | votca::csg::CsgApplication | protected |
| NeedsTopology(void) | votca::csg::CsgApplication | inlinevirtual |
| nframes_ | votca::csg::CsgApplication | protected |
| nframesMutex_ | votca::csg::CsgApplication | protected |
| nthreads_ | votca::csg::CsgApplication | protected |
| observers_ | votca::csg::CsgApplication | protected |
| op_desc_ | votca::tools::Application | private |
| op_groups_ | votca::tools::Application | protected |
| op_vm_ | votca::tools::Application | private |
| OptionsDesc() | votca::tools::Application | inline |
| OptionsMap() | votca::tools::Application | inline |
| ParseCommandLine(int argc, char **argv) | votca::tools::Application | private |
| ProcessData(Worker *worker) | votca::csg::CsgApplication | |
| ProgramName() override | GmxTopolApp | inlinevirtual |
| Run(void) override | votca::csg::CsgApplication | virtual |
| ShowHelpText(std::ostream &out) override | votca::csg::CsgApplication | virtual |
| StopExecution() | votca::tools::Application | inline |
| SynchronizeThreads(void) | votca::csg::CsgApplication | inlinevirtual |
| threadsMutexesIn_ | votca::csg::CsgApplication | protected |
| threadsMutexesOut_ | votca::csg::CsgApplication | protected |
| traj_reader_ | votca::csg::CsgApplication | protected |
| traj_readerMutex_ | votca::csg::CsgApplication | protected |
| VersionString() | votca::tools::Application | inlinevirtual |
| visible_options_ | votca::tools::Application | private |
| VisibleOptions() | votca::tools::Application | inline |
| WriteAtoms(ostream &out, Molecule &cg) | GmxTopolApp | protected |
| WriteInteractions(ostream &out, const Topology &top, Molecule &cg) | GmxTopolApp | protected |
| WriteMolecule(ostream &out, const Topology &top, Molecule &cg) | GmxTopolApp | protected |
| ~Application() | votca::tools::Application | virtual |
| ~CsgApplication() override=default | votca::csg::CsgApplication | |
1.12.0