votca
2024.2-dev
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votca
xtp
Topology
votca::xtp::Topology Member List
This is the complete list of members for
votca::xtp::Topology
, including all inherited members.
AddSegment
(std::string segment_name)
votca::xtp::Topology
AutoDetectBoxType
(const Eigen::Matrix3d &box)
votca::xtp::Topology
private
bc_
votca::xtp::Topology
private
BoxVolume
() const
votca::xtp::Topology
inline
FindAllSegmentsOnMolecule
(const Segment &seg1, const Segment &seg2) const
votca::xtp::Topology
getBox
() const
votca::xtp::Topology
inline
getSegment
(Index id)
votca::xtp::Topology
inline
getSegment
(Index id) const
votca::xtp::Topology
inline
GetShortestDist
(const Segment &seg1, const Segment &seg2) const
votca::xtp::Topology
getStep
() const
votca::xtp::Topology
inline
getTime
() const
votca::xtp::Topology
inline
NBList
()
votca::xtp::Topology
inline
NBList
() const
votca::xtp::Topology
inline
nblist_
votca::xtp::Topology
private
operator=
(const Topology &top)
votca::xtp::Topology
PbShortestConnect
(const Eigen::Vector3d &r1, const Eigen::Vector3d &r2) const
votca::xtp::Topology
ReadFromCpt
(CheckpointReader &r)
votca::xtp::Topology
Segments
()
votca::xtp::Topology
inline
Segments
() const
votca::xtp::Topology
inline
segments_
votca::xtp::Topology
private
setBox
(const Eigen::Matrix3d &box, csg::BoundaryCondition::eBoxtype boxtype=csg::BoundaryCondition::typeAuto)
votca::xtp::Topology
setStep
(Index step)
votca::xtp::Topology
inline
setTime
(double time)
votca::xtp::Topology
inline
step_
votca::xtp::Topology
private
time_
votca::xtp::Topology
private
Topology
()=default
votca::xtp::Topology
Topology
(const Topology &top)
votca::xtp::Topology
topology_version
()
votca::xtp::Topology
inline
private
static
WriteToCpt
(CheckpointWriter &w) const
votca::xtp::Topology
WriteToPdb
(std::string filename) const
votca::xtp::Topology
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