Inheritance diagram for CsgStatApp:

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Collaboration diagram for CsgStatApp:

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Public Member Functions
string	ProgramName () override
	program name
void	HelpText (ostream &out) override
	help text of application without version information
bool	DoTrajectory () override
	overload and return true to enable trajectory command line options
bool	DoMapping () override
	overload and return true to enable mapping command line options
bool	DoMappingDefault (void) override
	if DoMapping is true, will by default require mapping or not
bool	DoThreaded () override
bool	SynchronizeThreads () override
void	Initialize () override
	Initialize application data.
bool	EvaluateOptions () override
	Process command line options.
void	BeginEvaluate (Topology top, Topology top_ref) override
	called before the first frame
void	EndEvaluate () override
	called after the last frame
std::unique_ptr< CsgApplication::Worker >	ForkWorker () override
void	MergeWorker (CsgApplication::Worker *worker) override
Public Member Functions inherited from votca::csg::CsgApplication
	CsgApplication ()=default
	~CsgApplication () override=default
void	Run (void) override
	Main body of application.
void	ShowHelpText (std::ostream &out) override
virtual bool	NeedsTopology (void)
	if topology is always needed
virtual bool	EvaluateTopology (Topology , Topology =nullptr)
	called after topology was loaded
void	AddObserver (CGObserver *observer)
virtual void	EvalConfiguration (Topology top, Topology top_ref=nullptr)
bool	ProcessData (Worker *worker)
	Gets frames from TrajectoryReader in an ordered way and, if successful, calls Worker::EvalConfiguration for that frame.
Public Member Functions inherited from votca::tools::Application
	Application ()
virtual	~Application ()
int	Exec (int argc, char **argv)
	executes the program
virtual std::string	VersionString ()
	version string of application
void	CheckRequired (const std::string &option_name, const std::string &error_msg="")
	Check weather required option is set.
boost::program_options::options_description_easy_init	AddProgramOptions (const std::string &group="")
	add option for command line
boost::program_options::variables_map &	OptionsMap ()
	get available program options & descriptions
boost::program_options::options_description &	OptionsDesc ()
boost::program_options::options_description &	VisibleOptions ()
	filters out the Hidden group from the options descriptions
void	StopExecution ()
	call StopExecution after EvaluateOptions

Public Attributes
Imc	imc_
votca::Index	block_length_
string	extension_

Additional Inherited Members
Protected Attributes inherited from votca::csg::CsgApplication
std::list< CGObserver * >	observers_
bool	do_mapping_
std::vector< std::unique_ptr< Worker > >	myWorkers_
Index	nframes_
bool	is_first_frame_
Index	nthreads_
tools::Mutex	nframesMutex_
tools::Mutex	traj_readerMutex_
std::vector< std::unique_ptr< tools::Mutex > >	threadsMutexesIn_
	stores Mutexes used to impose order for input
std::vector< std::unique_ptr< tools::Mutex > >	threadsMutexesOut_
	stores Mutexes used to impose order for output
std::unique_ptr< TrajectoryReader >	traj_reader_
Protected Attributes inherited from votca::tools::Application
std::map< std::string, boost::program_options::options_description >	op_groups_
bool	continue_execution_ = true

Detailed Description

Definition at line 36 of file csg_stat.cc.

Member Function Documentation

◆ BeginEvaluate()

void CsgStatApp::BeginEvaluate	(	Topology *	top,
		Topology *	top_ref )

overridevirtual

called before the first frame

Reimplemented from votca::csg::CsgApplication.

Definition at line 118 of file csg_stat.cc.

◆ DoMapping()

bool CsgStatApp::DoMapping ( void )

inlineoverridevirtual

overload and return true to enable mapping command line options

Reimplemented from votca::csg::CsgApplication.

Definition at line 42 of file csg_stat.cc.

◆ DoMappingDefault()

bool CsgStatApp::DoMappingDefault ( void )

inlineoverridevirtual

if DoMapping is true, will by default require mapping or not

Reimplemented from votca::csg::CsgApplication.

Definition at line 43 of file csg_stat.cc.

◆ DoThreaded()

bool CsgStatApp::DoThreaded ( void )

inlineoverridevirtual

Reimplemented from votca::csg::CsgApplication.

Definition at line 44 of file csg_stat.cc.

◆ DoTrajectory()

bool CsgStatApp::DoTrajectory ( void )

inlineoverridevirtual

overload and return true to enable trajectory command line options

Reimplemented from votca::csg::CsgApplication.

Definition at line 41 of file csg_stat.cc.

◆ EndEvaluate()

void CsgStatApp::EndEvaluate ( )

overridevirtual

called after the last frame

Reimplemented from votca::csg::CsgApplication.

Definition at line 122 of file csg_stat.cc.

◆ EvaluateOptions()

bool CsgStatApp::EvaluateOptions ( )

overridevirtual

Process command line options.

Returns: true to continue, false to stop

EvaluateOptions is called by Run after parsing the command line. return true if everything is ok, false to stop and show help text.

Reimplemented from votca::csg::CsgApplication.

Definition at line 91 of file csg_stat.cc.

◆ ForkWorker()

std::unique_ptr< CsgApplication::Worker > CsgStatApp::ForkWorker ( void )

inlineoverridevirtual

User is required to overload ForkWorker and initialize workers.

Returns: worker

Reimplemented from votca::csg::CsgApplication.

Definition at line 52 of file csg_stat.cc.

◆ HelpText()

void CsgStatApp::HelpText ( ostream & out )

overridevirtual

help text of application without version information

Parameters

out	ostream for output

Implements votca::tools::Application.

Definition at line 66 of file csg_stat.cc.

◆ Initialize()

void CsgStatApp::Initialize ( )

overridevirtual

Initialize application data.

Initialize is called by run before parsing the command line. All necessary command line arguments can be added here

Reimplemented from votca::csg::CsgApplication.

Definition at line 76 of file csg_stat.cc.

◆ MergeWorker()

void CsgStatApp::MergeWorker ( CsgApplication::Worker * worker )

inlineoverridevirtual

User is required to overload MergeWorker and merge data from each worker.

Parameters

worker

Reimplemented from votca::csg::CsgApplication.

Definition at line 56 of file csg_stat.cc.

◆ ProgramName()

string CsgStatApp::ProgramName ( )

inlineoverridevirtual

program name

Returns: string with program name

overload this function to set the program name

Implements votca::tools::Application.

Definition at line 38 of file csg_stat.cc.

◆ SynchronizeThreads()

bool CsgStatApp::SynchronizeThreads ( void )

inlineoverridevirtual

Reimplemented from votca::csg::CsgApplication.

Definition at line 45 of file csg_stat.cc.

Member Data Documentation

◆ block_length_

votca::Index CsgStatApp::block_length_

Definition at line 62 of file csg_stat.cc.

◆ extension_

string CsgStatApp::extension_

Definition at line 63 of file csg_stat.cc.

◆ imc_

Imc CsgStatApp::imc_

Definition at line 61 of file csg_stat.cc.

The documentation for this class was generated from the following file:

csg/src/tools/csg_stat.cc

Public Member Functions

Public Attributes

Additional Inherited Members

Detailed Description

Member Function Documentation

◆ BeginEvaluate()

◆ DoMapping()

◆ DoMappingDefault()

◆ DoThreaded()

◆ DoTrajectory()

◆ EndEvaluate()

◆ EvaluateOptions()

◆ ForkWorker()

◆ HelpText()

◆ Initialize()

◆ MergeWorker()

◆ ProgramName()

◆ SynchronizeThreads()

Member Data Documentation

◆ block_length_

◆ extension_

◆ imc_