Inheritance diagram for CsgTestApp:

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Collaboration diagram for CsgTestApp:

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Protected Attributes
votca::tools::Histogram	rdf_
double	cut_off_
Protected Attributes inherited from votca::csg::CsgApplication
std::list< CGObserver * >	observers_
bool	do_mapping_
std::vector< std::unique_ptr< Worker > >	myWorkers_
Index	nframes_
bool	is_first_frame_
Index	nthreads_
tools::Mutex	nframesMutex_
tools::Mutex	traj_readerMutex_
std::vector< std::unique_ptr< tools::Mutex > >	threadsMutexesIn_
	stores Mutexes used to impose order for input
std::vector< std::unique_ptr< tools::Mutex > >	threadsMutexesOut_
	stores Mutexes used to impose order for output
std::unique_ptr< TrajectoryReader >	traj_reader_
Protected Attributes inherited from votca::tools::Application
std::map< std::string, boost::program_options::options_description >	op_groups_
bool	continue_execution_ = true

Private Member Functions
string	ProgramName () override
	program name
void	HelpText (ostream &out) override
	help text of application without version information
void	Initialize () override
	Initialize application data.
bool	DoTrajectory () override
	overload and return true to enable trajectory command line options
void	BeginEvaluate (Topology top, Topology top_ref) override
	called before the first frame
void	EvalConfiguration (Topology top, Topology top_ref) override
void	EndEvaluate () override
	called after the last frame

Additional Inherited Members
Public Member Functions inherited from votca::csg::CsgApplication
	CsgApplication ()=default
	~CsgApplication () override=default
bool	EvaluateOptions () override
	Process command line options.
void	Run (void) override
	Main body of application.
void	ShowHelpText (std::ostream &out) override
virtual bool	DoMapping (void)
	overload and return true to enable mapping command line options
virtual bool	DoMappingDefault (void)
	if DoMapping is true, will by default require mapping or not
virtual bool	DoThreaded (void)
virtual bool	SynchronizeThreads (void)
virtual bool	NeedsTopology (void)
	if topology is always needed
virtual bool	EvaluateTopology (Topology , Topology =nullptr)
	called after topology was loaded
void	AddObserver (CGObserver *observer)
bool	ProcessData (Worker *worker)
	Gets frames from TrajectoryReader in an ordered way and, if successful, calls Worker::EvalConfiguration for that frame.
virtual std::unique_ptr< Worker >	ForkWorker (void)
virtual void	MergeWorker (Worker *worker)
Public Member Functions inherited from votca::tools::Application
	Application ()
virtual	~Application ()
int	Exec (int argc, char **argv)
	executes the program
virtual std::string	VersionString ()
	version string of application
void	CheckRequired (const std::string &option_name, const std::string &error_msg="")
	Check weather required option is set.
boost::program_options::options_description_easy_init	AddProgramOptions (const std::string &group="")
	add option for command line
boost::program_options::variables_map &	OptionsMap ()
	get available program options & descriptions
boost::program_options::options_description &	OptionsDesc ()
boost::program_options::options_description &	VisibleOptions ()
	filters out the Hidden group from the options descriptions
void	StopExecution ()
	call StopExecution after EvaluateOptions

Detailed Description

Definition at line 29 of file template_serial.cc.

Member Function Documentation

◆ BeginEvaluate()

void CsgTestApp::BeginEvaluate	(	Topology *	top,
		Topology *	top_ref )

overrideprivatevirtual

called before the first frame

Reimplemented from votca::csg::CsgApplication.

Definition at line 72 of file template_serial.cc.

◆ DoTrajectory()

bool CsgTestApp::DoTrajectory ( void )

inlineoverrideprivatevirtual

overload and return true to enable trajectory command line options

Reimplemented from votca::csg::CsgApplication.

Definition at line 37 of file template_serial.cc.

◆ EndEvaluate()

void CsgTestApp::EndEvaluate ( )

overrideprivatevirtual

called after the last frame

Reimplemented from votca::csg::CsgApplication.

Definition at line 77 of file template_serial.cc.

◆ EvalConfiguration()

void CsgTestApp::EvalConfiguration	(	Topology *	top,
		Topology *	top_ref )

overrideprivatevirtual

Reimplemented from votca::csg::CsgApplication.

Definition at line 54 of file template_serial.cc.

◆ HelpText()

void CsgTestApp::HelpText ( ostream & out )

inlineoverrideprivatevirtual

help text of application without version information

Parameters

out	ostream for output

Implements votca::tools::Application.

Definition at line 31 of file template_serial.cc.

◆ Initialize()

void CsgTestApp::Initialize ( )

overrideprivatevirtual

Initialize application data.

Initialize is called by run before parsing the command line. All necessary command line arguments can be added here

Reimplemented from votca::csg::CsgApplication.

Definition at line 65 of file template_serial.cc.

◆ ProgramName()

string CsgTestApp::ProgramName ( )

inlineoverrideprivatevirtual

program name

Returns: string with program name

overload this function to set the program name

Implements votca::tools::Application.

Definition at line 30 of file template_serial.cc.

Member Data Documentation

◆ cut_off_

double CsgTestApp::cut_off_

protected

Definition at line 45 of file template_serial.cc.

◆ rdf_

votca::tools::Histogram CsgTestApp::rdf_

protected

Definition at line 44 of file template_serial.cc.

The documentation for this class was generated from the following file:

csg/share/template/template_serial.cc

Protected Attributes

Private Member Functions

Additional Inherited Members

Detailed Description

Member Function Documentation

◆ BeginEvaluate()

◆ DoTrajectory()

◆ EndEvaluate()

◆ EvalConfiguration()

◆ HelpText()

◆ Initialize()

◆ ProgramName()

Member Data Documentation

◆ cut_off_

◆ rdf_